Insertion junction: CLIP2.030999_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.030999
Chromosome:chromosome 1
Location:6457628
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g045640 (1 of 1) PTHR10584//PTHR10584:SF190 - SUGAR KINASE // RIBOKINASE-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCCGCCCTACCCAAGGTGCGATGCACCCAGCCGGCTGTCGATGAGTCG
Internal bar code:TGAACGTAGGGGAATCCCGCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:323
LEAP-Seq percent confirming:46.3415
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:GGGAGCCTATGAACGAGTCG
Suggested primer 2:CCCTACTACCCTGCAGACCT