Insertion junction: CLIP2.031002_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.031002
Chromosome:chromosome 17
Location:6630816
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g745697 (1 of 3) PTHR12136//PTHR12136:SF47 - STEROIDOGENIC ACUTE REGULATORY PROTEIN STAR // STEROIDOGENIC ACUTE REGULATORY-LIKE PROTEIN 1; STEROIDOGENIC ACUTE REGULATORY PROTEIN STAR (by homology) 5'UTR/CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGAGGAAACGGCCGTTGCGCCCACTCGGAAGTGGCGTGAGCAAACCGA
Internal bar code:GGCAGAATAGGGGCGATAACAT

Confirmation - LEAP-Seq

LEAP-Seq distance:964
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TTCGTTTGCTGCTGTCGTTG
Suggested primer 2:TATCCAGGAGCCAGGTTCGA