Insertion junction: CLIP2.031006_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.031006
Chromosome:chromosome 2
Location:1597097
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g085000 (1 of 1) PTHR22847//PTHR22847:SF423 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAGCATTGGCGCCACCTGCTCCACCTGCGCCACCTGCGACACTCGCCCG
Internal bar code:TGTTGAACACACAGGGGGGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1817
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCAGCAAGTTCAAGGTGC
Suggested primer 2:ATCTCCTCAGCCCTGTTTGC