Insertion junction: CLIP2.031006_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.031006
Chromosome:chromosome 2
Location:1597100
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g085000 (1 of 1) PTHR22847//PTHR22847:SF423 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTGGCGAGCGGCCGCCCAGCAGTTTGAAGGGCGCACTGCGGAATGCGG
Internal bar code:TGTTGAACACACAGGGGGGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1211
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:ATCTCCTCAGCCCTGTTTGC
Suggested primer 2:GCTCAGCAAGTTCAAGGTGC