Insertion junction: CLIP2.031008_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.031008
Chromosome:chromosome 1
Location:5998858
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g800109 (1 of 1) PTHR19331//PTHR19331:SF299 - LYSYL OXIDASE-RELATED // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACAACAGGCTCAACTCTGGGCGACATCCGCTTGGTTCCAACGGATGACG
Internal bar code:AGCCACGAGCTCTAGAGAAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:3088
LEAP-Seq percent confirming:19.2982
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:46
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:TCTTGGTCGAGGTGTCGTTG
Suggested primer 2:GCTCAGTGCGGCATACATTG