Insertion junction: CLIP2.031015_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.031015
Chromosome:chromosome 3
Location:4540279
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g176050 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGGCAGGCCAGAGGGCTGTCTCGTGTGTGCCCGACACACACGATCCAC
Internal bar code:GTTACCGCGCTGTTTACGAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3015
LEAP-Seq percent confirming:35.6164
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:47
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:CTTACTCGCCACCAGAAGCA
Suggested primer 2:GGGTACAGGAGCGAATACGG