Insertion junction: CLIP2.031022_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.031022
Chromosome:chromosome 1
Location:743027
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g004124 (1 of 3) 3.2.1.8 - Endo-1,4-beta-xylanase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGGTTCTGCTTGGGACCACACCACACGATTTTCGAATTCTGACCCAGC
Internal bar code:GAATTGGCTATTGACTTAGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:4071
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:115
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:115

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTTACTCTTCTTGGCGCC
Suggested primer 2:GGCAGGCAAGTAGTTGGGAT