Insertion junction: CLIP2.031027_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.031027
Chromosome:chromosome 6
Location:69121
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g249350 DMC3,DMT1A (1 of 4) K00558 - DNA (cytosine-5)-methyltransferase 1 (DNMT1, dcm); Putative DNA methylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTACGGACATGAGCCCGCTGCCACTGCCCGTCCAGCTTGTATGGGCACC
Internal bar code:TGCTTAAAAGTCGTAAAAATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1395
LEAP-Seq percent confirming:4.16667
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCTACAAGGGACAACGCG
Suggested primer 2:GCTGCTCATCTCATTTGGCG