Insertion junction: CLIP2.031030_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.031030
Chromosome:chromosome 11
Location:1524890
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g468700 CPLD65,HCAR1 7-hydroxymethyl chlorophyll a reductase; (1 of 1) 1.17.7.2 - 7-hydroxymethyl chlorophyll a reductase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAACTTCCGCACGTCCCCACACACATACATACATACACACGCACACGCAG
Internal bar code:CGGTTTGACCCCCACCTGTAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:524
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CACATACACACACCCGGACA
Suggested primer 2:TAACCCGTATCCCGCATGTG