Insertion junction: CLIP2.031031_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.031031
Chromosome:chromosome 6
Location:70204
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g249350 DMC3,DMT1A (1 of 4) K00558 - DNA (cytosine-5)-methyltransferase 1 (DNMT1, dcm); Putative DNA methylase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGCCTTGACCACCTCCGCTGCGTCCAGGTCCCGCAGCGGCAGCGACAA
Internal bar code:GTAGTGATCACCTCCCTAACAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3756
LEAP-Seq percent confirming:83.4646
LEAP-Seq n confirming:106
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:127

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGTTGTCCCTTGTAGACT
Suggested primer 2:CTTATAGTGCAGGCGGGGAG