Insertion junction: CLIP2.031037_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.031037
Chromosome:chromosome 1
Location:1996579
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g010950 (1 of 2) PF00023//PF12796//PF13920 - Ankyrin repeat (Ank) // Ankyrin repeats (3 copies) (Ank_2) // Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGACAGAGCGTCTTCCACCTGGCAGCGCGCTATGGGCGAGTGGACGTATT
Internal bar code:GTCAGGGATGGCATTTAACTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:967
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CACGCCCCTCTCTCCAAAAT
Suggested primer 2:CGCATACAGCTGGAATTGCC