Insertion junction: CLIP2.031043_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.031043
Chromosome:chromosome 6
Location:5110666
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00144780

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACTTTCGACTCGCCCGAACTTCTTGTCCCGTCTACACACATTGCTGCTT
Internal bar code:GGAGGCGCAAAAGTTTGAGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2903
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TTTCCGATCATCACGCCGAA
Suggested primer 2:CGAAGGTATGCGTGCGAAAG