Insertion junction: CLIP2.031045_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.031045
Chromosome:chromosome 11
Location:4056910
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g480750 (1 of 1) 3.4.19.5//3.5.1.1 - Beta-aspartyl-peptidase // Asparaginase / L-asparagine amidohydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACGAGATCAGTGGCCCTGACTCCCCTGCGCGCCCACTGCGGCACCCCAC
Internal bar code:ACAACGTCATGGTAGATAATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1182
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGTGTGTGACAGGCATAC
Suggested primer 2:CTACTGCCGTTGTATTGCGC