Insertion junction: CLIP2.031050_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.031050
Chromosome:chromosome 12
Location:3608165
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g513100 (1 of 1) 3.2.1.165 - Exo-1,4-beta-D-glucosaminidase / GlcNase CDS
Cre12.g801394 (1 of 8) IPR001163//IPR010920 - LSM domain, eukaryotic/archaea-type // LSM domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTCGCCAGCCTGATGCTGAGCTTGCCTCACTTGCCGCCGGATTAGGTTG
Internal bar code:GTTATGCGCGTGGGCCTCGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:270
LEAP-Seq percent confirming:4.7619
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTCCACCAGCTTCAACAT
Suggested primer 2:CTTGAACAGCTGGTCCTCGT