Insertion junction: CLIP2.031059_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.031059
Chromosome:chromosome 4
Location:1498085
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g213800 (1 of 1) PTHR10825//PTHR10825:SF5 - RING FINGER DOMAIN-CONTAINING, POLYCOMB GROUP COMPONENT // E3 UBIQUITIN-PROTEIN LIGASE RING1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAGCTCGTGCCAGTGTCCAGAAAATCCACATCTTTATAGCTCTGCCAA
Internal bar code:TACTAAGATGGCACATTTTAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:174
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:AATGGACGGATTTGGGGCTT
Suggested primer 2:CCGGTTTGCTTTGGTGAGTG