Insertion junction: CLIP2.031078_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.031078
Chromosome:chromosome 3
Location:3184028
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g165050 PMA4 (1 of 3) K01535 - H+-transporting ATPase (E3.6.3.6); Plasma membrane P-type calcium ATPase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGCCCGCGTACAGATCACCACCATGATCTACATGAAGGTCTCCGTCTC
Internal bar code:CGAGGAAGGTCAGGTTTTGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:288
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GGCGAGGTTCAGAAACTGGA
Suggested primer 2:GAAGTGGAACCTGAGGGTGG