Insertion junction: CLIP2.031095_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.031095
Chromosome:chromosome 9
Location:4070247
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g399067 (1 of 1) PTHR10641//PTHR10641:SF524 - MYB-LIKE DNA-BINDING PROTEIN MYB // ATMYB1 PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCCAAGGCCCAAGTCGACGGGCCCCAGGGGTCCCAGTGGCCCGCCGCC
Internal bar code:TGGTATTCGACCTCAAATAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2635
LEAP-Seq percent confirming:97.8723
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:CGCAGCGTGAAATGGAGATG
Suggested primer 2:GCTCAATGATGCTCAGCGTG