Insertion junction: CLIP2.031113_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.031113
Chromosome:chromosome 12
Location:2253599
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g508644 HDG1 (1 of 1) PTHR11850//PTHR11850:SF132 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // BEL1-LIKE HOMEODOMAIN PROTEIN 11; BELL-related homeodomain protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCTCTCAGCCACTGACGGCGCCACCGCCTCCGCCGCCGGTGTCGACAG
Internal bar code:TGGACAAATAGTGTGTAGTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2599
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GATGTGGTTGGGGGTAGTGG
Suggested primer 2:GATGGCGGATATGCTGTCGA