Insertion junction: CLIP2.031123_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.031123
Chromosome:chromosome 9
Location:5601039
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g409750 CAX2 (1 of 3) K07300 - Ca2+:H+ antiporter (chaA, CAX); CAX family cation antiporter, membrane protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAGGAGAGGATGGGCGGCATCGTGTGCAGGGGTGGACAGGGGTAAAGG
Internal bar code:AGTTTAATATATTCCTAGACCA

Confirmation - LEAP-Seq

LEAP-Seq distance:404
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GCACAGGAGCCCACATTTTG
Suggested primer 2:TGCAGGTTCCTGACTTCGTC