Insertion junction: CLIP2.031123_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.031123
Chromosome:chromosome 9
Location:5601039
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g409750 CAX2 (1 of 3) K07300 - Ca2+:H+ antiporter (chaA, CAX); CAX family cation antiporter, membrane protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATCAGTCACAACACAGTACACAGCCCCACCATCAGCTCCACCAAAAAGC
Internal bar code:GATTGAAGCATCTAAGTGTGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1008
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAGGTTCCTGACTTCGTC
Suggested primer 2:GCACAGGAGCCCACATTTTG