Insertion junction: CLIP2.031125_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.031125
Chromosome:chromosome 4
Location:2519628
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g222350 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACATCCGCCACCACCACAGGGCCGGCTAGCAGAATGCCCTTGCCCTGC
Internal bar code:GTGTTTTCTCGCTGCAAAAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:830
LEAP-Seq percent confirming:31.4286
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CGATTGATTGGCTGCTGAGC
Suggested primer 2:CATCAAAGGCAGCGACATCG