Insertion junction: CLIP2.031127_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.031127
Chromosome:chromosome 12
Location:2939598
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g502350 HEL50 (1 of 1) K10899 - ATP-dependent DNA helicase Q1 [EC:3.6.4.12] (RECQL); DEAD/DEAH box DNA/RNA helicase, related to RECQ1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAAGGAAGCGACCATTGCCAACCATAGCCTCTCAACGCGTATGCATAC
Internal bar code:GGTCTAATCAATGTGGTAGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:838
LEAP-Seq percent confirming:95.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:TTATGCAGCTGGTTGCCTGA
Suggested primer 2:ATCATGGCTGTGAGGTTGGG