Insertion junction: CLIP2.031132_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.031132
Chromosome:chromosome 6
Location:3689372
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278152 (1 of 40) 3.4.24.38 - Gametolysin / Lysin CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGATGCAGTTGGTGTCACAGCCCACAGAGGCAGTCCCCGCCCAGGCGCA
Internal bar code:AGATTTTAGGGTCCTGGTTGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1134
LEAP-Seq percent confirming:93.9394
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:TCAACTACCTCGCCACCAAC
Suggested primer 2:CCCGGGTAAGGCTTTCACAT