Insertion junction: CLIP2.031133_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.031133
Chromosome:chromosome 17
Location:3676639
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g725600 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGGAACGGCGTTGGGCGTCTGGGGTATGCGGTGACGGCGGAGACGCAT
Internal bar code:GATGCGTCCGTTCTGGAGTCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1877
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAGCCACCGTAATTGACA
Suggested primer 2:CAAGTAAGAGGGGCAGGTCG