Insertion junction: CLIP2.031137_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.031137
Chromosome:chromosome 3
Location:6679361
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g195410 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGTGCAGCTGCAGCGCTTGGGCGTGCGTGGCTGCTACCCAAGGCTTGAC
Internal bar code:TGGGGGGTGCTCCGGTGGAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:164
LEAP-Seq percent confirming:2.43902
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:40
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGCTCATGCGGCAAGATG
Suggested primer 2:GCACCTGATCCTCTACGAGC