Insertion junction: CLIP2.031142_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.031142
Chromosome:chromosome 10
Location:1168263
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g425750 (1 of 1) PTHR11227:SF18 - WD REPEAT DOMAIN PHOSPHOINOSITIDE-INTERACTING PROTEIN 3 intron
lncRNA_TCONS_00063058 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGTGGCAGCTGGGTGCACCCACCTTGGTCGGGGGGTACCGTGGCGCTG
Internal bar code:GAGGCGTTCCGTTGAAGCAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:728
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGAGATGGGAGGAGGGAC
Suggested primer 2:GTGTGGTGAGAGGTGGAGTG