Insertion junction: CLIP2.031162_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.031162
Chromosome:chromosome 15
Location:1257210
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g801725 NCL64 Nuclear Control of chloroplast-Like 64; (1 of 39) PF08373 - RAP domain (RAP) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAACCTGGCAAACGCGCTGTATGCCCTGGGCAAGCTGCGGGAGGATCAG
Internal bar code:CGCGCTTTTTGTGCACTGTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:4827
LEAP-Seq percent confirming:1.63934
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:60
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:TTTCCTTCGGTGTCTGGAGC
Suggested primer 2:CGCACCTCCTTAGCTCGTAG