Insertion junction: CLIP2.031165_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.031165
Chromosome:chromosome 13
Location:43024
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g801504 (1 of 1) K03470 - ribonuclease HII (rnhB) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCCATGCCTCGCAGCGCCGCTGAGGTCCGCTCACTGAGGGCCGAGCAC
Internal bar code:CATATTCTCAATGCATAACATC

Confirmation - LEAP-Seq

LEAP-Seq distance:4607
LEAP-Seq percent confirming:44.4444
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:75
LEAP-Seq n unique pos:135

Suggested primers for confirmation by PCR

Suggested primer 1:CATATCCAGGTCCTGTCCGC
Suggested primer 2:CTGTCACTCCTCAGGCCTTG