Insertion junction: CLIP2.031169_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.031169
Chromosome:chromosome 5
Location:463925
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g244000 (1 of 1) IPR000253//IPR009836 - Forkhead-associated (FHA) domain // Protein of unknown function DUF1399 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTCGCCCCTGCTTATACTCAGTTTCTTCGCATTACAGCCCTCATACAT
Internal bar code:ATTAGTGAAGAGAGCACGTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2429
LEAP-Seq percent confirming:86.2069
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTCAGCCTCCAACAGACT
Suggested primer 2:ACACAGCAACAGCAGCAAAG