Insertion junction: CLIP2.031179_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.031179
Chromosome:chromosome 17
Location:558892
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g699550 (1 of 37) IPR008979 - Galactose-binding domain-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCTCGTTACCGATACGCAACTGTGTACGCCTTGCCCCGCAACCCCACA
Internal bar code:GTGGTACCGCACTCAAGCTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1303
LEAP-Seq percent confirming:96.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GAACGTGCCGTAGAGACACA
Suggested primer 2:CGGAGCAATTGCAACACCAA