Insertion junction: CLIP2.031180_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.031180
Chromosome:chromosome 12
Location:467465
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g494650 CSV10 Chlamydomonas-specific family protein; (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGGGAGCGCGAGATCCAAACCCGCACGTTGTGGCCTGCCGCCGCGTTCG
Internal bar code:AAACTGAAATTTTCGCGCTTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1337
LEAP-Seq percent confirming:94.2857
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTTTGCCTGCGTGTTAGC
Suggested primer 2:GAACAACGAGGCAGAGGACA