Insertion junction: CLIP2.031180_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.031180
Chromosome:chromosome 12
Location:467475
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g494650 CSV10 Chlamydomonas-specific family protein; (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCGCCCTCCGCCGCACTGCAGCCACCCGGCGAGCCCATACGCATGTCC
Internal bar code:AAACTGAAATTTTCGCGCTTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1752
LEAP-Seq percent confirming:67.6923
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:GAACAACGAGGCAGAGGACA
Suggested primer 2:TTGTTTGCCTGCGTGTTAGC