Insertion junction: CLIP2.031183_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.031183
Chromosome:chromosome 3
Location:3000799
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g163300 CDT1 (1 of 1) PTHR28637:SF1 - DNA REPLICATION FACTOR CDT1; DNA replication initiation factor, CDT1-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGAGGCAGCGCCAATTGGGGCGTTGGCGGCCGTGATCAAGACACAGACC
Internal bar code:CTGAGAGGGTAATTGTTTGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:624
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGGATCCCCTCCCTTTTC
Suggested primer 2:CTCCATCTCGACATCCTCGC