Insertion junction: CLIP2.031183_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.031183
Chromosome:chromosome 3
Location:3000800
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g163300 CDT1 (1 of 1) PTHR28637:SF1 - DNA REPLICATION FACTOR CDT1; DNA replication initiation factor, CDT1-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAACATGAATGAACACACATACACCCCCCCCGCCCGCACAGGCCTCTCCC
Internal bar code:CTGAGAGGGTAATTGTTTGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1063
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCATCTCGACATCCTCGC
Suggested primer 2:GCTGGATCCCCTCCCTTTTC