Insertion junction: CLIP2.031188_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.031188
Chromosome:chromosome 3
Location:8221941
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g200200 (1 of 18) K08824 - cyclin-dependent kinase-like [EC:2.7.11.22] (CDKL) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGAAACCAGGAGGACCGGTGGCAGGCTAGGGGTGCCCCTGTTGACCGG
Internal bar code:CAGGTGCGGAGCAGCTGTTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:5133
LEAP-Seq percent confirming:67.9245
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:TTACACCTGCTACTGCCTGC
Suggested primer 2:AGTCGTCACACGCGTTAGTT