Insertion junction: CLIP2.031193_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.031193
Chromosome:chromosome 4
Location:1728972
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g212150 (1 of 1) IPR013815//IPR027417 - ATP-grasp fold, subdomain 1 // P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGGCCGCCCACGTGTCTGGACCCGGCGCACACAAACCTGCAGCTGTGC
Internal bar code:TCGTATTATACGGTATGACTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:4922
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:96
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:96

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGGTTGCACATGTGTTGG
Suggested primer 2:CACCTTGTTTCAGCCGGTTG