Insertion junction: CLIP2.031200_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.031200
Chromosome:chromosome 1
Location:4641908
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g032100 (1 of 1) K10570 - DNA excision repair protein ERCC-8 (ERCC8, CKN1, CSA) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTTCCCATTTTAACGCCCACAAACGGGCCAGAGTGCCGGCAAAGGCGC
Internal bar code:AAGGCCGTACGGTTAGGTCTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1544
LEAP-Seq percent confirming:41.6667
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TAGTGCGGTTTGCTGTACGT
Suggested primer 2:CTTCCACAACCGTGCAACAG