Insertion junction: CLIP2.031202_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.031202
Chromosome:chromosome 17
Location:5331910
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g738000 AGG2 Aggregation 2; (1 of 6) PTHR15907:SF21 - DUF614 FAMILY PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTACCCGTCACACTGCATCCCGTTGTTCTGTAGGGATGACGTTCATCGG
Internal bar code:CTTGTTGGGCACCTTTAAGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1250
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CAAATGCGGGTTGGGAAGTG
Suggested primer 2:GTAGTCGTCGTCGTACGGTC