Insertion junction: CLIP2.031205_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.031205
Chromosome:chromosome 3
Location:3084092
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g164200 (1 of 1) IPR023381 - YP001051499.1-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCTGCCCGCCTATGCCTGCCCGCTTCGCAACGCCGGCTGCCGCACTCC
Internal bar code:GCGGAAAAAGATCAGTTCATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3291
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:89
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:89

Suggested primers for confirmation by PCR

Suggested primer 1:TGATGCATCACAAGCCCCAT
Suggested primer 2:CCAGTCCTTTGCAGCACAAC