Insertion junction: CLIP2.031211_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.031211
Chromosome:chromosome 16
Location:5435222
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g682600 (1 of 1) PTHR24079//PTHR24079:SF0 - FAMILY NOT NAMED // KNIRPS-RELATED PROTEIN-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACGAAACTCGCAAAGTAGCGAGCGCGACACAGCGCTCCGCTACTTAACT
Internal bar code:TAGCCGTCAATGATGGGGTAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4303
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:CACACGAGTGTCAGAGGCTT
Suggested primer 2:AGCGGCACCATCCAAATGTA