Insertion junction: CLIP2.031215_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.031215
Chromosome:chromosome 10
Location:5699211
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g459400 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAACGGCAGGACGTAGAGCTCTACGTTGGTAGGGTTGGGGCAGGCACGCC
Internal bar code:CTAGTTTATTGGCGAGTCCCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1733
LEAP-Seq percent confirming:46.4286
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:30
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTTGCCCTTGTACTCGTC
Suggested primer 2:CACAGAGCCATCAACCCAGT