Insertion junction: CLIP2.031216_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.031216
Chromosome:chromosome 14
Location:2374277
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00107669

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACACAGCATGTGTGCTCGAATGGTGTGGATATGACGTTAAGGGAAGTAA
Internal bar code:CTCGTGCGGGGGGGGAAGGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1378
LEAP-Seq percent confirming:57.1429
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:ATCACTCCCAACCGTGTCAC
Suggested primer 2:TCCCTTCAACTAGCAGCAGC