Insertion junction: CLIP2.031231_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.031231
Chromosome:chromosome 2
Location:6386990
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAAAACAGGGCAAGCCAGCTGCAGTTACAGCTTTTGGTATGTGTTTGTA
Internal bar code:AGCAAGTGTTCGACGTATATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1665
LEAP-Seq percent confirming:96.6667
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTTGTCATGGCTGGAGCA
Suggested primer 2:GGCAGCCTGAGAAGACACAT