Insertion junction: CLIP2.031237_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.031237
Chromosome:chromosome 12
Location:8541712
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g549150 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACCTCGGACGCGGGGTTTGCCTGTTGCGGGGCCCGTTTGCGAGCCGTGT
Internal bar code:CGCGTAGATCCCTGGCTCGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1873
LEAP-Seq percent confirming:61.5385
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGGAAGGTTCGACACAGA
Suggested primer 2:CCGACTCCTGCTGCTAACAA