Insertion junction: CLIP2.031237_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.031237
Chromosome:chromosome 12
Location:8541851
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g549150 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTAACAAGGGTATAGGAGCGGGACTAAGGTGCAGCACTAGTAGCCAGCG
Internal bar code:CGCGTAGATCCCTGGCTCGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2777
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:CCGACTCCTGCTGCTAACAA
Suggested primer 2:CGTGGAAGGTTCGACACAGA