Insertion junction: CLIP2.031240_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.031240
Chromosome:chromosome 2
Location:6385314
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g388000 CDKD1 CDK activating kinase; (1 of 1) K02202 - cyclin-dependent kinase 7 (CDK7) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTAGCGGGTTCTTCGCTGGCATATGCCCGCTGATAGGAGGCGGGCAGTA
Internal bar code:TTTGCGGCTGGCATTGTCTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:5216
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:127
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:127

Suggested primers for confirmation by PCR

Suggested primer 1:TCCACGGCAACAGCATTTTG
Suggested primer 2:GGACGCCTACCCGAAAAAGA