Insertion junction: CLIP2.031244_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.031244
Chromosome:chromosome 6
Location:3504256
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278115 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGAACAAGGCCGTACCAGGTGTGTAGATGGGTATCGGAAGGCTCCTGGG
Internal bar code:CGCTGGGGAGTCGGCTGCTCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:167
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TAGCCTGCAGGTGACGAAAG
Suggested primer 2:GCCTAATTCTCGGCGCAAAG