Insertion junction: CLIP2.031246_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.031246
Chromosome:chromosome 3
Location:1506474
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g151550 (1 of 1) IPR000104//IPR029060 - Antifreeze protein, type I // PIN domain-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTCCTGCGGGGCACCAGCACTCGATGCGGCGCGCTCCGCCATCGTTACG
Internal bar code:GTGACGAAAGATCAGAACTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:421
LEAP-Seq percent confirming:96.1538
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GTCAGAGTCAGAGCCTGGTG
Suggested primer 2:CAATCCAGCCTGTAATGCGC