Insertion junction: CLIP2.031252_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.031252
Chromosome:chromosome 9
Location:2988712
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393395 (1 of 1) PTHR33477:SF3 - EMB|CAB72147.1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGACACTTCACATGTGTGCTCTGTGCTCTGCAGGCAAGCACGTGGAGCG
Internal bar code:TGATTAAGGACCTTGGGGTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:5310
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCAAAGCATCCCGGAAGA
Suggested primer 2:GTAACCTGACCAGCTAGCCC