Insertion junction: CLIP2.031256_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.031256
Chromosome:chromosome 3
Location:2369762
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g158400 FAP218 Flagellar Associated Protein 218; (1 of 1) IPR023160 - Ribonuclease HII, helix-loop-helix cap domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCAGCAGGCTTGATGAGTGAGTCATGGCACTGCGCGATCCGTCGCGAG
Internal bar code:ACAACCCGCAGCTTTTAAGCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:4089
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CTTACCGTACGGCGCTTTTG
Suggested primer 2:ACTGCTGCAAGACTCAGACC